PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Lus10013614
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Linaceae; Linum
Family ERF
Protein Properties Length: 309aa    MW: 34675.5 Da    PI: 6.782
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Lus10013614genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.92.6e-183888155
          AP2  1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                 s++ GVr+++ +grWvAeI+d      k+ r +lg+f tae+Aa+a+++a+  l+g
  Lus10013614 38 SKFVGVRQRP-SGRWVAEIKDtT----KKIRMWLGTFETAEKAARAYDEAACLLRG 88
                 79********.7*********33....36**********************99987 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541713.2E-193896IPR016177DNA-binding domain
CDDcd000184.89E-323895No hitNo description
PfamPF008476.4E-133888IPR001471AP2/ERF domain
SMARTSM003803.1E-3539102IPR001471AP2/ERF domain
PROSITE profilePS5103219.5853996IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.109.2E-283996IPR001471AP2/ERF domain
PRINTSPR003672.6E-74051IPR001471AP2/ERF domain
PRINTSPR003672.6E-76278IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 309 aa     Download sequence    Send to blast
MEIHFQQNGD ATTVPVVMSK PSKGKGRSRV ANSINNNSKF VGVRQRPSGR WVAEIKDTTK  60
KIRMWLGTFE TAEKAARAYD EAACLLRGSN TRTNFITHVS FDSPLASRIR NLLEKKKSNK  120
KKLQADAIVQ VPIKPEGPVH TASPPTYFSS SCSTSSSSSS ISDDNSSSSE TVLIHDSRLF  180
DDVYKPDLST CCQDLQIELP SPPIEHQSCD TWSFGFDHIN GFGHKFQYTP SHDTFEFPRN  240
YNSICSSTSA DDEQQQQQQQ QREFSEFDRM KVERQISASL YAISGVHEYM ETVRDPNDGL  300
WDLPPLFC*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015899372.17e-94PREDICTED: ethylene-responsive transcription factor RAP2-11-like
TrEMBLA0A067L5C61e-88A0A067L5C6_JATCU; Uncharacterized protein
STRINGGLYMA16G04410.14e-85(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF33413069
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.14e-30related to AP2 11